Sequence Similarity Clusters for the Entities in PDB 1KSN

Entity #1 | Chains: A
COAGULATION FACTOR XA protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 71 119 214
95 % 83 134 256 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 83 134 270
70 % 83 135 301
50 % 582 683 14
40 % 1299 1696 4
30 % 1397 1846 6
Entity #2 | Chains: B
COAGULATION FACTOR XA protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 32 39 1014
95 % 33 40 1347 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.3
PDBFlex
90 % 33 40 1374
70 % 33 40 1393
50 % 46 74 757
40 % 46 74 792
30 % 46 74 783

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.