Sequence Similarity Clusters for the Entities in PDB 1KSK

Entity #1 | Chains: A
RIBOSOMAL SMALL SUBUNIT PSEUDOURIDINE SYNTHASE A protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 28354
95 % 1 3 23631 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 3 22901
70 % 1 3 20979
50 % 2 4 12135
40 % 2 4 10988
30 % 2 4 9558

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures