Sequence Similarity Clusters for the Entities in PDB 1KSK

Entity #1 | Chains: A
RIBOSOMAL SMALL SUBUNIT PSEUDOURIDINE SYNTHASE A protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 27871
95 % 1 3 24418 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 1 3 23602
70 % 1 3 21482
50 % 2 4 12314
40 % 2 4 11049
30 % 2 4 9397

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures