Sequence Similarity Clusters for the Entities in PDB 1KSK

Entity #1 | Chains: A
RIBOSOMAL SMALL SUBUNIT PSEUDOURIDINE SYNTHASE A protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 27175
95 % 1 3 22703 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.9
PDBFlex
90 % 1 3 22030
70 % 1 3 20209
50 % 2 4 11658
40 % 2 4 10574
30 % 2 4 9191

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.