Sequence Similarity Clusters for the Entities in PDB 1KSJ

Entity #1 | Chains: A
arf-like protein 2 protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26690
95 % 4 6 9974
90 % 4 6 9847
70 % 4 6 9346
50 % 11 14 3318
40 % 48 75 320
30 % 533 745 16
Entity #2 | Chains: B
RETINAL ROD RHODOPSIN-SENSITIVE CGMP 3',5'-CYCLIC PHOSPHODIESTERASE DELTA-SUBUNIT protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 19 1668
95 % 20 20 2064
90 % 20 20 2120
70 % 20 20 2129
50 % 20 20 2107
40 % 20 20 2109
30 % 20 20 2014

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.