Sequence Similarity Clusters for the Entities in PDB 1KSH

Entity #1 | Chains: A
arf-like protein 2 protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 26059
95 % 1 6 9751
90 % 1 6 9637
70 % 1 6 9148
50 % 3 14 3243
40 % 21 74 318
30 % 283 727 15
Entity #2 | Chains: B
RETINAL ROD RHODOPSIN-SENSITIVE CGMP 3',5'-CYCLIC PHOSPHODIESTERASE DELTA-SUBUNIT protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 14 2326
95 % 7 15 2623
90 % 7 15 2669
70 % 7 15 2641
50 % 7 15 2602
40 % 7 15 2578
30 % 7 15 2412

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.