Sequence Similarity Clusters for the Entities in PDB 1KSH

Entity #1 | Chains: A
arf-like protein 2 protein, length: 186 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 27805
95 % 1 6 10412
90 % 1 6 10281
70 % 1 6 9773
50 % 3 14 3432
40 % 21 80 296
30 % 299 772 16
Entity #2 | Chains: B
RETINAL ROD RHODOPSIN-SENSITIVE CGMP 3',5'-CYCLIC PHOSPHODIESTERASE DELTA-SUBUNIT protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 20 1696
95 % 10 21 2069
90 % 10 21 2120
70 % 10 21 2119
50 % 10 21 2112
40 % 10 21 2101
30 % 10 21 2022

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.