Sequence Similarity Clusters for the Entities in PDB 1KRL

Entity #1 | Chains: A,C
MONELLIN, CHAIN A protein, length: 44 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 7709
95 % 3 4 8268 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.0
PDBFlex
90 % 3 4 8217
70 % 3 4 7937
50 % 3 4 7312
40 % 3 4 6801
30 % 3 4 6065
Entity #2 | Chains: B,D
MONELLIN, CHAIN B protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 7706
95 % 3 4 8266 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 3 4 8215
70 % 3 4 7932
50 % 3 4 7310
40 % 3 4 6799
30 % 3 4 6063

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures