Sequence Similarity Clusters for the Entities in PDB 1KRL

Entity #1 | Chains: A,C
MONELLIN, CHAIN A protein, length: 44 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 7833
95 % 3 4 8395 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.0
PDBFlex
90 % 3 4 8341
70 % 3 4 8051
50 % 3 4 7417
40 % 3 4 6887
30 % 3 4 6142
Entity #2 | Chains: B,D
MONELLIN, CHAIN B protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 7830
95 % 3 4 8393 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 3 4 8339
70 % 3 4 8046
50 % 3 4 7415
40 % 3 4 6885
30 % 3 4 6140

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures