Sequence Similarity Clusters for the Entities in PDB 1KRB

Entity #1 | Chains: A
UREASE protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 29 31 1609
95 % 29 31 1895 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 29 31 1934
70 % 43 45 1275
50 % 44 47 1084
40 % 44 47 1096
30 % 44 47 1084
Entity #2 | Chains: B
UREASE protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 29 31 1628
95 % 29 31 1893 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.1
PDBFlex
90 % 29 31 1933
70 % 29 31 1953
50 % 29 31 2016
40 % 29 31 1991
30 % 29 31 1900
Entity #3 | Chains: C
UREASE protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 26328
95 % 29 31 1926 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 29 31 1966
70 % 29 31 1983
50 % 43 50 947
40 % 43 50 968
30 % 43 50 953

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures