Sequence Similarity Clusters for the Entities in PDB 1KRA

Entity #1 | Chains: A
UREASE protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 26 31 1391
95 % 26 31 1861 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 26 31 1904
70 % 39 44 1280
50 % 40 46 1091
40 % 40 46 1100
30 % 40 46 1081
Entity #2 | Chains: B
UREASE protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 26 31 1389
95 % 26 31 1859 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.1
PDBFlex
90 % 26 31 1902
70 % 26 31 1934
50 % 26 31 1952
40 % 26 31 1960
30 % 26 31 1887
Entity #3 | Chains: C
UREASE protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 10 6105
95 % 26 31 1818
90 % 26 31 1854
70 % 26 31 1884
50 % 39 49 935
40 % 39 49 965
30 % 39 49 944

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures