Sequence Similarity Clusters for the Entities in PDB 1KRA

Entity #1 | Chains: A
UREASE protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 26 31 1302
95 % 26 31 1758 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 26 31 1797
70 % 39 44 1219
50 % 40 46 1035
40 % 40 46 1045
30 % 40 46 1022
Entity #2 | Chains: B
UREASE protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 26 31 1300
95 % 26 31 1756 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.1
PDBFlex
90 % 26 31 1795
70 % 26 31 1816
50 % 26 31 1832
40 % 26 31 1841
30 % 26 31 1782
Entity #3 | Chains: C
UREASE protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 10 5783
95 % 26 31 1721 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 26 31 1753
70 % 26 31 1777
50 % 39 49 897
40 % 39 49 920
30 % 39 49 900

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.