Sequence Similarity Clusters for the Entities in PDB 1KQM

Entity #1 | Chains: A
MYOSIN heavy chain protein, length: 835 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 14 3467
95 % 7 14 4248 Flexibility: High
Max RMSD: 27.4, Avg RMSD: 10.1
PDBFlex
90 % 7 17 3374
70 % 9 21 2717
50 % 18 50 446
40 % 64 101 284
30 % 86 126 238
Entity #2 | Chains: B
MYOSIN REGULATORY LIGHT CHAIN protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 18 2637
95 % 11 18 3293
90 % 11 18 3338
70 % 14 24 2122
50 % 17 47 507
40 % 196 339 39
30 % 217 366 49
Entity #3 | Chains: C
MYOSIN ESSENTIAL LIGHT CHAIN protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 17 2859
95 % 14 24 2081
90 % 14 24 2130
70 % 14 24 2125
50 % 16 28 1824
40 % 197 339 39
30 % 218 366 49

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.