Sequence Similarity Clusters for the Entities in PDB 1KQM

Entity #1 | Chains: A
MYOSIN heavy chain protein, length: 835 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 14 3416
95 % 7 14 4191 Flexibility: High
Max RMSD: 28.6, Avg RMSD: 13.9
PDBFlex
90 % 7 17 3323
70 % 9 21 2684
50 % 18 50 441
40 % 64 101 280
30 % 86 126 234
Entity #2 | Chains: B
MYOSIN REGULATORY LIGHT CHAIN protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 18 2601
95 % 11 18 3243 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.3
PDBFlex
90 % 11 18 3291
70 % 14 24 2101
50 % 17 47 503
40 % 195 336 34
30 % 216 363 47
Entity #3 | Chains: C
MYOSIN ESSENTIAL LIGHT CHAIN protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 17 2820
95 % 14 24 2053 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 14 24 2104
70 % 14 24 2104
50 % 16 28 1796
40 % 196 336 34
30 % 217 363 47

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.