Sequence Similarity Clusters for the Entities in PDB 1KQG

Entity #1 | Chains: A
FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, MAJOR SUBUNIT protein, length: 1015 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49370
95 % 2 2 25053 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 2 2 24224
70 % 2 2 22045
50 % 2 2 19111
40 % 3 3 11205
30 % 3 3 9740
Entity #2 | Chains: B
FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, IRON-SULFUR SUBUNIT protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 36496
95 % 2 2 28588 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 2 2 27597
70 % 2 2 24927
50 % 2 2 21378
40 % 2 2 18865
30 % 2 2 16048
Entity #3 | Chains: C
FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, CYTOCHROME B556(FDN) SUBUNIT protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40215
95 % 2 2 30738 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 2 2 29516
70 % 2 2 26458
50 % 2 2 22591
40 % 2 2 19885
30 % 2 2 16844

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.