Sequence Similarity Clusters for the Entities in PDB 1KQF

Entity #1 | Chains: A
FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, MAJOR SUBUNIT protein, length: 1015 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48498
95 % 1 2 24474 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 2 23681
70 % 1 2 21644
50 % 1 2 18801
40 % 1 3 10965
30 % 1 3 9527
Entity #2 | Chains: B
FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, IRON-SULFUR SUBUNIT protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 35743
95 % 1 2 27994 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 2 27040
70 % 1 2 24501
50 % 1 2 21058
40 % 1 2 18579
30 % 1 2 15799
Entity #3 | Chains: C
FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, CYTOCHROME B556(FDN) SUBUNIT protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 39421
95 % 1 2 30130 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 2 28950
70 % 1 2 26022
50 % 1 2 22264
40 % 1 2 19594
30 % 1 2 16590

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.