Sequence Similarity Clusters for the Entities in PDB 1KQD

Entity #1 | Chains: A,B,C,D
OXYGEN-INSENSITIVE NAD(P)H NITROREDUCTASE protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 2343
95 % 6 6 2730 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 6 6 2796
70 % 10 21 729
50 % 10 22 702
40 % 10 22 734
30 % 12 25 662

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures