Sequence Similarity Clusters for the Entities in PDB 1KQ1

Entity #1 | Chains: A,B,H,I,K,M,N,R,S,T,W,Y
Host Factor for Q beta protein, length: 77 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 1323
95 % 1 3 1766 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 1 3 1801
70 % 1 3 1828
50 % 1 3 1855
40 % 1 3 1855
30 % 1 7 932

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.