Sequence Similarity Clusters for the Entities in PDB 1KPV

Entity #1 | Chains: A
H-2 class I histocompatibility antigen, K-B alpha chain protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 49 367
95 % 6 65 343
90 % 6 70 349
70 % 100 662 7
50 % 100 667 7
40 % 103 715 11
30 % 110 832 15
Entity #2 | Chains: B
beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 131 95
95 % 12 213 66
90 % 12 213 70
70 % 123 857 5
50 % 126 877 5
40 % 126 877 9
30 % 126 877 14
Entity #3 | Chains: P
Nucleocapsid protein protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.