Sequence Similarity Clusters for the Entities in PDB 1KPU

Entity #1 | Chains: A
H-2 class I histocompatibility antigen, K-B alpha chain protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 49 356
95 % 2 65 341
90 % 2 70 345
70 % 36 656 7
50 % 36 661 7
40 % 37 709 11
30 % 37 826 14
Entity #2 | Chains: B
beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 131 93
95 % 2 212 65
90 % 2 212 70
70 % 48 856 5
50 % 49 876 4
40 % 49 876 9
30 % 49 876 13
Entity #3 | Chains: P
nucleocapsid protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.