Sequence Similarity Clusters for the Entities in PDB 1KPR

Entity #1 | Chains: A,C
HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ALPHA CHAIN protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 18423
95 % 6 9 3064
90 % 6 9 3105
70 % 597 649 7
50 % 599 654 7
40 % 637 701 11
30 % 721 817 14
Entity #2 | Chains: B,D
BETA-2-MICROGLOBULIN protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 516 568 2
95 % 556 611 3
90 % 565 620 4
70 % 755 847 5
50 % 768 867 4
40 % 768 867 9
30 % 768 867 13
Entity #3 | Chains: P,Q
Peptide VMAPRTVLL protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.