Sequence Similarity Clusters for the Entities in PDB 1KPK

Entity #1 | Chains: A,B,C,D,E,F
putative channel transporter protein, length: 473 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 3897
95 % 38 40 555 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 38 40 584
70 % 39 41 578
50 % 39 41 619
40 % 41 43 626
30 % 41 43 611

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures