Sequence Similarity Clusters for the Entities in PDB 1KPK

Entity #1 | Chains: A,B,C,D,E,F
putative channel transporter protein, length: 473 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 3291
95 % 38 40 578 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 38 40 610
70 % 39 41 599
50 % 39 41 641
40 % 41 43 654
30 % 41 43 649

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures