Sequence Similarity Clusters for the Entities in PDB 1KOG

Entity #1 | Chains: I,J,K,L,M,N,O,P
Threonyl-tRNA synthetase mRNA rna, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B,C,D,E,F,G,H
Threonyl-tRNA synthetase protein, length: 401 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 10 1528
95 % 10 10 2037 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.0
PDBFlex
90 % 10 10 2084
70 % 10 10 2087
50 % 10 10 2080
40 % 18 18 1134
30 % 18 18 1126

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.