Sequence Similarity Clusters for the Entities in PDB 1KO6

Entity #1 | Chains: A,C
Nuclear Pore Complex Protein Nup98 protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38769
95 % 1 1 29395
90 % 1 1 28179
70 % 1 1 25312
50 % 1 1 21694
40 % 1 1 19088
30 % 1 1 16146
Entity #2 | Chains: B,D
Nuclear Pore Complex Protein Nup98 protein, length: 64 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44612
95 % 1 1 33311
90 % 1 1 31888
70 % 1 1 28519
50 % 1 1 24484
40 % 1 1 21621
30 % 1 1 18318

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.