Sequence Similarity Clusters for the Entities in PDB 1KNY

Entity #1 | Chains: A,B
KANAMYCIN NUCLEOTIDYLTRANSFERASE protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37548
95 % 1 2 17397 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 2 17036
70 % 1 2 15840
50 % 1 2 13822
40 % 1 2 12353
30 % 1 2 10588

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.