Sequence Similarity Clusters for the Entities in PDB 1KNY

Entity #1 | Chains: A,B
KANAMYCIN NUCLEOTIDYLTRANSFERASE protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22630
95 % 1 2 20249 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 2 19669
70 % 1 2 18056
50 % 1 2 15685
40 % 1 2 13923
30 % 1 2 11693

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures