Sequence Similarity Clusters for the Entities in PDB 1KNX

Entity #1 | Chains: A,B,C,D,E,F
Probable HPr(Ser) kinase/phosphatase protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 12658
95 % 1 1 12288 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.7
PDBFlex
90 % 1 1 12118
70 % 1 1 11441
50 % 1 1 10258
40 % 1 1 9323
30 % 2 2 6474

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures