Sequence Similarity Clusters for the Entities in PDB 1KNU

Entity #1 | Chains: A,B
PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 112 148 110
95 % 129 171 120 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 1.6
PDBFlex
90 % 129 171 123
70 % 129 171 141
50 % 173 230 109
40 % 173 230 129
30 % 998 1284 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3U9Q 1 A Peroxisome proliferator-activated receptor gamma Ligand Binding Domain, UNP residues 236-504 9606
2 3B1M 1 A Peroxisome proliferator-activated receptor gamma ligand binding domain, UNP residues 234-505 9606
3 3V9T 1 A Peroxisome proliferator-activated receptor gamma ligand binding domain, UNP residues 234-505 9606
4 3V9V 1 A Peroxisome proliferator-activated receptor gamma ligand binding domain, UNP residues 234-505 9606
5 5Y2T 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 235-505 9606
6 4CI5 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN, RESIDUES 206-477 9606
7 5Y2O 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 235-505 9606
8 5GTN 1 A Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-505 9606
9 2XKW 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN, RESIDUES 204-477 9606
10 3ET3 1 A Peroxisome proliferator-activated receptor gamma LIGAND BINDING DOMAIN 9606
11 4Y29 1 A Peroxisome proliferator-activated receptor gamma UNP residues 236-504 9606
12 1ZGY 1 A Peroxisome proliferator activated receptor gamma PPARgamma Ligand Binding Domain 9606
13 3WJ5 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 235-505 9606
14 3LMP 1 A Peroxisome proliferator-activated receptor gamma UNP residues 234-505 9606
15 3WJ4 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 235-505 9606
16 2FVJ 1 A Peroxisome proliferator-activated receptor gamma LIGAND BINDING DOMAIN, RESIDUES 207-477 9606
17 5JI0 2 D Peroxisome proliferator-activated receptor gamma 9606
18 5TWO 1 A Peroxisome proliferator-activated receptor gamma lignad binding domain (UNP residues 234-505) 9606
19 4F9M 1 A Peroxisome proliferator-activated receptor gamma Ligand binding domain, UNP residues 234-505 9606
20 4A4W 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN, RESIDUES 195-477 9606
21 5UGM 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 235-505 9606
22 2YFE 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN, RESIDUES 195-477 9606
23 3FEJ 1 A Peroxisome proliferator-activated receptor gamma PPAR gamma ligand binding domain 9606
24 2HFP 1 A Peroxisome proliferator-activated receptor gamma Ligand Binding Domain (residues 234-505) 9606
25 2Q5S 1 A, B Peroxisome Proliferator-Activated Receptor gamma Ligand binding domain 9606
26 4A4V 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN, RESIDUES 195-477 9606
27 3VSO 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain 9606
28 2GTK 1 A Peroxisome proliferator-activated receptor gamma 9606
29 3KMG 1 A, D Peroxisome proliferator-activated receptor gamma UNP residues 234-505 9606
30 3B0Q 1 A, B Peroxisome proliferator-activated receptor gamma UNP RESIDUES 231-504 9606
31 2ZVT 1 A, B Peroxisome proliferator-activated receptor gamma Ligand-binding domain 9606
32 5HZC 1 A, B Peroxisome proliferator-activated receptor gamma 9606
33 3NOA 1 A, B Peroxisome proliferator-activated receptor gamma lignad binding domain 9606
34 5LSG 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 223-505 9606
35 3V9Y 1 A Peroxisome proliferator-activated receptor gamma ligand binding domain, UNP residues 234-505 9606
36 4EM9 1 A, B Peroxisome proliferator-activated receptor gamma LIGAND BINDING DOMAIN, UNP RESIDUES 235-505 9606
37 2Q59 1 A Peroxisome Proliferator-Activated Receptor gamma CYS A 285 IS 2-HYDROXYETHYLATED Ligand binding domain 9606
38 2Q59 2 B Peroxisome Proliferator-Activated Receptor gamma Ligand binding domain 9606
39 2HWQ 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain 9606
40 3ADX 1 A, B Peroxisome proliferator-activated receptor gamma ligand-binding domain, residues in UNP 223-505 9606
41 2Q61 1 A, B Peroxisome Proliferator-Activated Receptor gamma Ligand binding domain 9606
42 3TY0 1 A, B Peroxisome proliferator-activated receptor gamma 9606
43 3T03 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 234-505 9606
44 5GTO 1 A Peroxisome proliferator-activated receptor gamma UNP RESIDUES 1-283 9606
45 2VSR 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA 9-(S)-HODE LIGAND BINDING DOMAIN, RESIDUES 202-475 9606
46 4XUH 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 232-505 9606
47 4R06 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 233-505 9606
48 2F4B 1 A, B Peroxisome proliferator-activated receptor gamma LIGAND BINDING DOMAIN 9606
49 4R6S 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 231-505 9606
50 3WMH 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain, UNP residues 223-504 9606
51 3B0R 1 A, B Peroxisome proliferator-activated receptor gamma UNP RESIDUES 231-504 9606
52 3ADW 1 A, B Peroxisome proliferator-activated receptor gamma ligand-binding domain, residues in UNP 223-505 9606
53 5DWL 1 A Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-505 9606
54 3PBA 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain 9606
55 4R2U 1 A, D Peroxisome proliferator-activated receptor gamma UNP residues 231-505 9606
56 3VJH 1 A, B Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-504 9606
57 3FUR 1 A Peroxisome proliferator-activated receptor gamma LBD (ligand binding domain), UNP residues 234-505 9606
58 3R5N 1 A Peroxisome proliferator-activated receptor gamma ligand binding domain (UNP residues 232-505) 9606
59 5TTO 1 A, B Peroxisome proliferator-activated receptor gamma residues 233-505 9606
60 1FM9 2 D PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN - RESIDUES 206 - 477 9606
61 6F2L 1 A, B Peroxisome proliferator-activated receptor gamma 9606
62 5DVC 1 A Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-505 9606
63 3G9E 1 A Peroxisome proliferator-activated receptor gamma LIGAND BINDING DOMAIN 9606
64 4L96 1 A Peroxisome proliferator-activated receptor gamma LIGAND BINDING DOMAIN (UNP RESIDUES 235-505) 9606
65 3BC5 1 A Peroxisome proliferator-activated receptor gamma ligand binding domain 9606
66 2PRG 1 A, B PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA LBD (LIGAND BINDING DOMAIN), RESIDUES 207-477 9606
67 6ENQ 1 A, B Peroxisome proliferator-activated receptor gamma 9606
68 2I4J 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain (LBD), residues 223-504 9606
69 2Q5P 1 A, B Peroxisome Proliferator-Activated Receptor gamma Ligand binding domain 9606
70 3SZ1 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain 9606
71 1FM6 2 D, X PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN - RESIDUES 206 - 477 9606
72 4XUM 1 A, B Peroxisome proliferator-activated receptor gamma 9606
73 4L98 1 A, B Peroxisome proliferator-activated receptor gamma LIGAND BINDING DOMAIN (UNP RESIDUES 235-505) 9606
74 3H0A 2 D Peroxisome proliferator-activated receptor gamma UNP RESIDUES 234-505 9606
75 2ATH 1 A, B Peroxisome proliferator activated receptor gamma ligand binding domain 9606
76 3PO9 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain 9606
77 4YT1 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain, UNP residues 223-504 9606
78 3ADV 1 A, B Peroxisome proliferator-activated receptor gamma ligand-binding domain, residues in UNP 223-505 9606
79 3ADS 1 A, B Peroxisome proliferator-activated receptor gamma ligand-binding domain, residues in UNP 223-505 9606
80 2VV1 1 A PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA 4-HDHA LIGAND BINDING DOMAIN, RESIDUES 202-475 9606
81 2VV1 2 B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA 4-HDHA LIGAND BINDING DOMAIN, RESIDUES 202-475 9606
82 4XLD 1 A Peroxisome proliferator-activated receptor gamma UNP residues 203-477 9606
83 3HOD 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain (LBD), UNP residues 223-504 9606
84 3ET0 1 A, B Peroxisome proliferator-activated receptor gamma LIGAND BINDING DOMAIN 9606
85 5GTP 1 A Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-505 9606
86 2P4Y 1 A, B Peroxisome proliferator-activated receptor gamma Ligand-binding Domain (LBD), Residues 231-505 9606
87 4OJ4 1 A Peroxisome proliferator-activated receptor gamma Ligand binding domain (UNP residues 232-505) 9606
88 5F9B 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 195-477 9606
89 4EMA 1 A, B Peroxisome proliferator-activated receptor gamma LIGAND BINDING DOMAIN, UNP RESIDUES 235-505 9606
90 2Q8S 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain (residue 235-505) 9606
91 2POB 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain 9606
92 1PRG 1 A, B PROTEIN (PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA) LBD (LIGAND BINDING DOMAIN), RESIDUES 207-476 9606
93 3CS8 1 A Peroxisome proliferator-activated receptor gamma LBD domain (UNP residues 234-504) 9606
94 3AN3 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain 9606
95 2I4Z 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain (LBD), residues 223-504 9606
96 3VN2 1 A Peroxisome proliferator-activated receptor gamma Ligand biding domain, UNP residues 225-505 9606
97 4HEE 1 X Peroxisome proliferator-activated receptor gamma peroxisome proliferator-activated receptor-gamma (UNP Residues 235-505) 9606
98 3X1H 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain, UNP residues 232-505 9606
99 5WQX 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain, UNP residues 232-505 9606
100 2Q6S 1 A, B Peroxisome Proliferator-Activated Receptor gamma Ligand binding domain 9606
101 2I4P 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain (LBD) 9606
102 3AN4 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain 9606
103 5U5L 1 A, B Peroxisome proliferator-activated receptor gamma residues 233-505 9606
104 3GBK 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domian, UNP residues 235-505 9606
105 3QT0 1 A Peroxisome proliferator-activated receptor gamma UNP residues 235-505 9606
106 2VV4 1 A PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA 6-OXOOTE LIGAND BINDING DOMAIN, RESIDUES 202-475 9606
107 2VV4 2 B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA 6-OXOOTE LIGAND BINDING DOMAIN, RESIDUES 202-475 9606
108 3OSW 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain 9606
109 2G0H 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain(residues 207-477) 9606
110 1K74 2 D Peroxisome proliferator activated receptor gamma ligand binding domain residues - 206 - 477 9606
111 5WR1 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain, UNP residues 232-505 9606
112 1RDT 3 D Peroxisome proliferator activated receptor gamma ligand binding doamin 9606
113 2ZK2 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain 9606
114 3VSP 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain 9606
115 2HWR 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain 9606
116 3OSI 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain 9606
117 3IA6 1 A, B Peroxisome proliferator-activated receptor gamma UNP residue 235-505 9606
118 2VST 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA 13-(S)-HODE LIGAND BINDING DOMAIN, RESIDUES 202-475 9606
119 1I7I 1 A, B PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN 9606
120 3X1I 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain, UNP residues 232-505 9606
121 4XTA 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 232-505 9606
122 3R8I 1 A, B Peroxisome proliferator-activated receptor gamma unp residues 223-505 9606
123 3R8A 1 A, B Peroxisome proliferator-activated receptor gamma 9606
124 4PVU 1 A, B Peroxisome proliferator-activated receptor gamma Ligand Binding Domain, UNP RESIDUES 223-505 9606
125 3CWD 1 A, B Peroxisome proliferator-activated receptor gamma PPAR gamma LBD domain 9606
126 1ZEO 1 A, B Peroxisome proliferator activated receptor gamma Ligand Binding Domain (LBD), residues 203-477 9606
127 2G0G 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain(residues 207-477) 9606
128 2ZNO 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain 9606
129 1KNU 1 A, B PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN 9606
130 2ZK0 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain 9606
131 2VV0 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA DHA LIGAND BINDING DOMAIN, RESIDUES 202-475 9606
132 5DV8 1 A Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-505 9606
133 3D6D 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain (LBD), UNP residues 223-504 9606
134 3VJI 1 A, B Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-504 9606
135 3K8S 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 234-505, Ligand binding domain 9606
136 6C5Q 1 A Peroxisome proliferator-activated receptor gamma 9606
137 3S9S 1 A Peroxisome proliferator-activated receptor gamma LIGAND BINDING DOMAIN (RESIDUES 234-505) 9606
138 2ZK6 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain 9606
139 2ZK5 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain 9606
140 5DV3 1 A Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-505 9606
141 4PWL 1 A, B Peroxisome proliferator-activated receptor gamma Ligand Binding Domain, UNP RESIDUES 223-505 9606
142 3ADU 1 A, B Peroxisome proliferator-activated receptor gamma ligand-binding domain, residues in UNP 223-505 9606
143 4JL4 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 223-505 9606
144 3ADT 1 A, B Peroxisome proliferator-activated receptor gamma ligand-binding domain, residues in UNP 223-505 9606
145 6AN1 1 A, B Peroxisome proliferator-activated receptor gamma 9606
146 4E4Q 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain (UNP residues 223-505) 9606
147 1WM0 1 X Peroxisome proliferator activated receptor gamma residues 186-477 9606
148 5DV6 1 A Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-505 9606
149 2Q6R 1 A, B Peroxisome Proliferator-Activated Receptor gamma Ligand binding domain 9606
150 5AZV 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 203-505 9606
151 4O8F 1 A, B Peroxisome proliferator-activated receptor gamma Ligand Binding Domain 9606
152 2ZK4 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain 9606
153 2VV2 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA 5-HEPA LIGAND BINDING DOMAIN, RESIDUES 202-475 9606
154 2ZK3 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain 9606
155 3B3K 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 223-504 9606
156 2OM9 1 A, B, C, D Peroxisome proliferator-activated receptor gamma Ligand binding domain, residues 232-505 9606
157 1NYX 1 A, B peroxisome proliferator activated receptor gamma Ligand binding domain 9606
158 2ZK1 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain 9606
159 3PRG 1 A PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA LIGAND BINDING DOMAIN 9606
160 4E4K 1 A, B Peroxisome proliferator-activated receptor gamma Ligand binding domain (UNP residues 223-505) 9606
161 3CDS 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain (LBD), UNP residues 223-504 9606
162 5DSH 1 A Peroxisome proliferator-activated receptor gamma UNP RESIDUES 223-505 9606
163 4FGY 1 A Peroxisome proliferator-activated receptor gamma LIGAND BINDING DOMAIN, UNP RESIDUES 235-504 9606
164 3HO0 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain (LBD), UNP residues 223-504 9606
165 2VV3 1 A, B PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA 4-OXODHA LIGAND BINDING DOMAIN, RESIDUES 202-475 9606
166 3CDP 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain (LBD), UNP residues 223-504 9606
167 4JAZ 1 A, B Peroxisome proliferator-activated receptor gamma UNP residues 223-505 9606
168 6C5T 1 A Peroxisome proliferator-activated receptor gamma 9606
169 4PRG 1 A, B, C, D PROTEIN (PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA) 0072 PARTIAL AGONIST COCRYSTAL LIGAND BINDING DOMAIN, RESIDUES 207-476 9606
170 5WR0 1 A, B Peroxisome proliferator-activated receptor gamma ligand binding domain, UNP residues 232-505 9606
171 2QMV 1 A Peroxisome proliferator-activated receptor gamma Ligand Binding Domain, residues 235-504 9606