Sequence Similarity Clusters for the Entities in PDB 1KNU

Entity #1 | Chains: A,B
PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 141 184 98
95 % 148 192 111 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.6
PDBFlex
90 % 148 192 119
70 % 148 192 135
50 % 192 251 110
40 % 192 251 129
30 % 1040 1339 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures