Sequence Similarity Clusters for the Entities in PDB 1KNU

Entity #1 | Chains: A,B
PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 115 152 88
95 % 122 160 115 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 1.7
PDBFlex
90 % 122 160 119
70 % 122 160 135
50 % 164 217 104
40 % 164 217 128
30 % 776 983 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.