Sequence Similarity Clusters for the Entities in PDB 1KNP

Entity #1 | Chains: A
L-aspartate oxidase protein, length: 540 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 32279
95 % 2 3 21907 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.9
PDBFlex
90 % 2 3 21271
70 % 3 4 14609
50 % 3 4 12947
40 % 3 4 11717
30 % 23 74 458

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures