Sequence Similarity Clusters for the Entities in PDB 1KNM

Entity #1 | Chains: A
ENDO-1,4-BETA-XYLANASE A protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 29648
95 % 1 3 24566 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 1 3 23741
70 % 1 3 21599
50 % 1 3 18688
40 % 1 3 16644
30 % 1 3 14228

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures