Sequence Similarity Clusters for the Entities in PDB 1KNL

Entity #1 | Chains: A
ENDO-1,4-BETA-XYLANASE A protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 29180
95 % 2 3 24221 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 2 3 23421
70 % 2 3 21319
50 % 2 3 18447
40 % 2 3 16442
30 % 2 3 14061

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures