Sequence Similarity Clusters for the Entities in PDB 1KNK

Entity #1 | Chains: A
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 17 954
95 % 16 20 1012 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 16 20 1040
70 % 23 27 699
50 % 48 52 298
40 % 54 58 261
30 % 57 61 266

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.