Sequence Similarity Clusters for the Entities in PDB 1KNE

Entity #1 | Chains: A
HETEROCHROMATIN PROTEIN 1 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 30269
95 % 6 6 13580 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 6 6 13366
70 % 6 6 12573
50 % 7 8 8537
40 % 7 8 7822
30 % 7 9 5985
Entity #2 | Chains: P
Trimethylated Histone H3 protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures