Sequence Similarity Clusters for the Entities in PDB 1KNE

Entity #1 | Chains: A
HETEROCHROMATIN PROTEIN 1 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 13211
95 % 6 6 12542 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 6 6 12350
70 % 6 6 11648
50 % 7 8 8394
40 % 7 9 6658
30 % 7 9 5671
Entity #2 | Chains: P
Trimethylated Histone H3 protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures