Sequence Similarity Clusters for the Entities in PDB 1KNE

Entity #1 | Chains: A
HETEROCHROMATIN PROTEIN 1 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 28992
95 % 3 3 24029 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 3 3 23263
70 % 3 3 21266
50 % 4 5 11973
40 % 4 5 10842
30 % 4 6 8494
Entity #2 | Chains: P
Trimethylated Histone H3 protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.