Sequence Similarity Clusters for the Entities in PDB 1KND

Entity #1 | Chains: A
2,3-DIHYDROXYBIPHENYL 1,2-DIOXYGENASE protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 12458
95 % 4 6 12082 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 4 6 11911
70 % 4 6 11263
50 % 9 16 3951
40 % 9 16 3780
30 % 15 26 1534

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures