Sequence Similarity Clusters for the Entities in PDB 1KNC

Entity #1 | Chains: A,B,C
AhpD protein protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 3406
95 % 1 4 3194 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 1 4 3249
70 % 1 4 3191
50 % 1 4 3124
40 % 1 4 3050
30 % 1 4 2818

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1KNC 1 A, B, C AhpD protein 1773 1.11.1.15 | Details
2 1GU9 1 A, B, C, D, E, F, G, H, I, J, K, L ALKYLHYDROPEROXIDASE D 1773
3 1LW1 1 A, B, C ALKYLHYDROPEROXIDASE D 1773 1.11.1.15 | Details
4 1ME5 1 A, B, C ALKYLHYDROPEROXIDASE D 1773 1.11.1.15 | Details