Sequence Similarity Clusters for the Entities in PDB 1KNC

Entity #1 | Chains: A,B,C
AhpD protein protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 3375
95 % 1 4 3171 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 1 4 3225
70 % 1 4 3167
50 % 1 4 3105
40 % 1 4 3036
30 % 1 4 2805

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures