Sequence Similarity Clusters for the Entities in PDB 1KNC

Entity #1 | Chains: A,B,C
AhpD protein protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 3695
95 % 1 4 2970 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 1 4 3019
70 % 1 4 2993
50 % 1 4 2946
40 % 1 4 2905
30 % 1 4 2716

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures