Sequence Similarity Clusters for the Entities in PDB 1KNC

Entity #1 | Chains: A,B,C
AhpD protein protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 3567
95 % 1 4 2880 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.5
PDBFlex
90 % 1 4 2926
70 % 1 4 2904
50 % 1 4 2869
40 % 1 4 2832
30 % 1 4 2644

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.