Sequence Similarity Clusters for the Entities in PDB 1KNB

Entity #1 | Chains: A
ADENOVIRUS TYPE 5 FIBER PROTEIN protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62746
95 % 1 2 20849 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.2
PDBFlex
90 % 1 2 20231
70 % 1 2 18563
50 % 2 3 12239
40 % 10 22 988
30 % 14 39 437

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures