Sequence Similarity Clusters for the Entities in PDB 1KNB

Entity #1 | Chains: A
ADENOVIRUS TYPE 5 FIBER PROTEIN protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62634
95 % 1 2 19002 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.2
PDBFlex
90 % 1 2 18514
70 % 1 2 17114
50 % 2 3 12031
40 % 10 22 972
30 % 13 37 435

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures