Sequence Similarity Clusters for the Entities in PDB 1KNB

Entity #1 | Chains: A
ADENOVIRUS TYPE 5 FIBER PROTEIN protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60135
95 % 1 2 18151 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.2
PDBFlex
90 % 1 2 17688
70 % 1 2 16374
50 % 2 3 11523
40 % 10 22 933
30 % 13 37 411

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.