Sequence Similarity Clusters for the Entities in PDB 1KNB

Entity #1 | Chains: A
ADENOVIRUS TYPE 5 FIBER PROTEIN protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63809
95 % 1 2 19403 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.2
PDBFlex
90 % 1 2 18889
70 % 1 2 17440
50 % 2 3 12255
40 % 10 22 984
30 % 13 37 442

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures