Sequence Similarity Clusters for the Entities in PDB 1KN2

Entity #1 | Chains: L
IG ANTIBODY D2.3 (LIGHT CHAIN) protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 15182
95 % 20 51 683 Flexibility: Low
Max RMSD: 6.4, Avg RMSD: 1.9
PDBFlex
90 % 20 52 687
70 % 456 2287 1
50 % 939 4633 1
40 % 939 4633 1
30 % 1032 5461 1
Entity #2 | Chains: H
IG ANTIBODY D2.3 (HEAVY CHAIN) protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 9 7154
95 % 4 9 7724
90 % 4 10 6962
70 % 457 2244 2
50 % 940 4633 1
40 % 940 4633 1
30 % 1033 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.