Sequence Similarity Clusters for the Entities in PDB 1KN1

Entity #1 | Chains: A
Allophycocyanin protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66082
95 % 1 1 45712
90 % 1 1 43323
70 % 1 10 1458
50 % 2 13 1182
40 % 35 87 32
30 % 62 143 18
Entity #2 | Chains: B
Allophycocyanin protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66017
95 % 1 1 45666
90 % 2 8 2854
70 % 2 12 1134
50 % 2 12 1183
40 % 36 87 32
30 % 63 143 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures