Sequence Similarity Clusters for the Entities in PDB 1KN1

Entity #1 | Chains: A
Allophycocyanin protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52995
95 % 1 1 43646
90 % 1 1 41536
70 % 1 10 1493
50 % 2 13 1206
40 % 36 88 34
30 % 64 145 16
Entity #2 | Chains: B
Allophycocyanin protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 1523
95 % 1 6 1799
90 % 1 6 1840
70 % 2 12 1165
50 % 2 12 1212
40 % 37 88 34
30 % 65 145 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures