Sequence Similarity Clusters for the Entities in PDB 1KN1

Entity #1 | Chains: A
Allophycocyanin protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65237
95 % 1 1 45162
90 % 1 1 42822
70 % 1 10 1443
50 % 2 13 1162
40 % 35 87 29
30 % 62 143 18
Entity #2 | Chains: B
Allophycocyanin protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65172
95 % 1 1 45116
90 % 2 8 2809
70 % 2 12 1117
50 % 2 12 1163
40 % 36 87 29
30 % 63 143 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures