Sequence Similarity Clusters for the Entities in PDB 1KMQ

Entity #1 | Chains: A
TRANSFORMING PROTEIN RHOA protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 29217
95 % 5 45 659 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.5
PDBFlex
90 % 5 45 687
70 % 5 47 693
50 % 6 143 196
40 % 6 144 205
30 % 78 822 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures