Sequence Similarity Clusters for the Entities in PDB 1KMN

Entity #1 | Chains: A,B,C,D
HISTIDYL-TRNA SYNTHETASE protein, length: 424 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 3139
95 % 4 4 3901 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 0.7
PDBFlex
90 % 4 4 3939
70 % 4 4 3900
50 % 5 5 3332
40 % 10 11 1784
30 % 30 33 853

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3LC0 1 A Histidyl-tRNA synthetase UNP residues 45-478 5693 6.1.1.21 | Details
2 4YRI 1 A Histidyl-tRNA synthetase, putative UNP residues 45-478 5693 6.1.1.21 | Details
3 4YRQ 1 A Histidyl-tRNA synthetase UNP residues 45-478 5693 6.1.1.21 | Details
4 4YRT 1 A Histidyl-tRNA synthetase UNP residues 45-478 5693 6.1.1.21 | Details
5 4YRC 1 A Histidyl-tRNA synthetase UNP residues 45-478 5693 6.1.1.21 | Details
6 5E3I 1 A, B Histidine--tRNA ligase 470 6.1.1.21 | Details
7 4YP0 1 A Histidyl-tRNA synthetase UNP residues 45-478 5693 6.1.1.21 | Details
8 4YRG 1 A Histidyl-tRNA synthetase UNP residues 45-478 5693 6.1.1.21 | Details
9 4YRK 1 A, B Histidyl-tRNA synthetase UNP residues 45-478 5693 6.1.1.21 | Details
10 4YPF 1 A Histidyl-tRNA synthetase UNP residues 45-478 5693 6.1.1.21 | Details
11 4YRN 1 A, B Histidyl-tRNA synthetase UNP residues 45-478 5693 6.1.1.21 | Details
12 4YRE 1 A, B Histidyl-tRNA synthetase UNP residues 45-478 5693 6.1.1.21 | Details
13 4YRF 1 A Histidyl-tRNA synthetase, putative UNP residues 45-478 5693 6.1.1.21 | Details
14 4YRL 1 A Histidyl-tRNA synthetase UNP residues 45-478 5693 6.1.1.21 | Details
15 4YRP 1 A, B Histidyl-tRNA synthetase UNP residues 45-478 5693 6.1.1.21 | Details
16 4YRJ 1 A Histidyl-tRNA synthetase UNP residues 45-478 5693 6.1.1.21 | Details
17 4YRM 1 A, B Histidyl-tRNA synthetase UNP residues 45-478 5693 6.1.1.21 | Details
18 4YRR 1 A, B Histidyl-tRNA synthetase UNP residues 45-478 5693 6.1.1.21 | Details
19 4YRO 1 A Histidyl-tRNA synthetase UNP residues 45-478 5693 6.1.1.21 | Details
20 1H4V 1 B HISTIDYL-TRNA SYNTHETASE LIGAND FREE FORM OF THE ENZYME 274 6.1.1.21 | Details
21 1WU7 1 A, B Histidyl-tRNA synthetase 2303 6.1.1.21 | Details
22 4RDX 1 A Histidine--tRNA ligase histidinyl-tRNA synthetase 274 6.1.1.21 | Details
23 4YRS 1 A Histidyl-tRNA synthetase UNP residues 45-478 5693 6.1.1.21 | Details
24 1QE0 1 A, B Histidine--tRNA ligase 1280 6.1.1.21 | Details
25 4E51 1 A, B Histidine--tRNA ligase 57975 6.1.1.21 | Details
26 1KMM 1 A, B, C, D HISTIDYL-TRNA SYNTHETASE 562 6.1.1.21 | Details
27 1ADJ 1 A, B, C, D HISTIDYL-TRNA SYNTHETASE HISTIDINE PRESENT IN THE ACTIVE SITE 274 6.1.1.21 | Details
28 2EL9 1 A, B, C, D Histidyl-tRNA synthetase 562 6.1.1.21 | Details
29 1HTT 1 A, B, C, D HISTIDYL-TRNA SYNTHETASE 562 6.1.1.21 | Details
30 1KMN 1 A, B, C, D HISTIDYL-TRNA SYNTHETASE 562 6.1.1.21 | Details
31 1ADY 1 A, B, C, D HISTIDYL-TRNA SYNTHETASE HISTIDYL-ADENYLATE PRODUCED ENZYMATICALLY IN THE CRYSTAL IS PRESENT IN THE ACTIVE SITE 274 6.1.1.21 | Details
32 3HRK 1 A, B Histidyl-tRNA synthetase UNP residues 45-478 5693 6.1.1.21 | Details
33 3HRI 1 A, B, C, D, E, F Histidyl-tRNA synthetase 5691 6.1.1.21 | Details