Sequence Similarity Clusters for the Entities in PDB 1KMN

Entity #1 | Chains: A,B,C,D
HISTIDYL-TRNA SYNTHETASE protein, length: 424 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 3318
95 % 4 4 4098 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 4 4 4143
70 % 4 4 4084
50 % 5 5 3487
40 % 10 11 1878
30 % 30 33 886

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures