Sequence Similarity Clusters for the Entities in PDB 1KMM

Entity #1 | Chains: A,B,C,D
HISTIDYL-TRNA SYNTHETASE protein, length: 424 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 3202
95 % 1 4 3962 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 1 4 4005
70 % 1 4 3953
50 % 2 5 3368
40 % 6 11 1814
30 % 26 33 860

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures