Sequence Similarity Clusters for the Entities in PDB 1KMM

Entity #1 | Chains: A,B,C,D
HISTIDYL-TRNA SYNTHETASE protein, length: 424 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 3813
95 % 1 4 4175 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 1 4 4223
70 % 1 4 4141
50 % 2 5 3527
40 % 6 11 1940
30 % 26 33 901

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures