Sequence Similarity Clusters for the Entities in PDB 1KMI

Entity #1 | Chains: Y
Chemotaxis protein cheY protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 16 1607
95 % 70 74 310
90 % 71 75 322
70 % 71 75 367
50 % 80 84 400
40 % 89 93 383
30 % 226 256 116
Entity #2 | Chains: Z
Chemotaxis protein cheZ protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61026
95 % 1 1 42762
90 % 1 1 40667
70 % 1 1 35820
50 % 1 1 30522
40 % 1 1 26917
30 % 1 1 22820

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures