Sequence Similarity Clusters for the Entities in PDB 1KMH

Entity #1 | Chains: A
ATPase alpha subunit protein, length: 507 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 31091
95 % 1 2 25326
90 % 1 2 24498
70 % 1 2 22367
50 % 45 71 166
40 % 45 71 182
30 % 45 71 197
Entity #2 | Chains: B
ATPase beta subunit protein, length: 498 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 31203
95 % 1 2 25398 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 24566
70 % 46 72 138
50 % 46 72 167
40 % 46 72 183
30 % 46 72 198

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.