Sequence Similarity Clusters for the Entities in PDB 1KME

Entity #1 | Chains: A,B
Bacteriorhodopsin protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 46 77 330
95 % 68 120 241 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 69 121 257
70 % 69 121 289
50 % 75 136 260
40 % 75 136 277
30 % 109 194 174

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.