Sequence Similarity Clusters for the Entities in PDB 1KMC

Entity #1 | Chains: A,B
Caspase-7 protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35699
95 % 12 17 1568 Flexibility: Low
Max RMSD: 7.2, Avg RMSD: 1.9
PDBFlex
90 % 12 17 1593
70 % 12 17 1611
50 % 71 76 405
40 % 93 99 242
30 % 101 111 215
Entity #2 | Chains: C,D
X-LINKED INHIBITOR OF APOPTOSIS PROTEIN protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 22998
95 % 3 4 10524
90 % 3 4 10383
70 % 3 4 9837
50 % 3 4 8909
40 % 3 4 8164
30 % 3 4 7189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.