Sequence Similarity Clusters for the Entities in PDB 1KMC

Entity #1 | Chains: A,B
Caspase-7 protein, length: 303 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36249
95 % 13 18 1483 Flexibility: Low
Max RMSD: 6.6, Avg RMSD: 1.9
PDBFlex
90 % 13 18 1513
70 % 13 18 1515
50 % 72 77 400
40 % 94 100 241
30 % 102 112 218
Entity #2 | Chains: C,D
X-LINKED INHIBITOR OF APOPTOSIS PROTEIN protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 23360
95 % 3 4 10674
90 % 3 4 10534
70 % 3 4 10011
50 % 3 4 9057
40 % 3 4 8290
30 % 3 4 7305

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.