Sequence Similarity Clusters for the Entities in PDB 1KM8

Entity #1 | Chains: A
RIBONUCLEASE, OOCYTES protein, length: 111 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 16117
95 % 1 4 15079 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 1 4 14804
70 % 1 4 13875
50 % 1 4 12314
40 % 14 25 2177
30 % 353 742 22

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures