Sequence Similarity Clusters for the Entities in PDB 1KM5

Entity #1 | Chains: A
OROTIDINE 5'-PHOSPHATE DECARBOXYLASE protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 15 2192
95 % 57 114 134 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.5
PDBFlex
90 % 57 114 138
70 % 57 114 160
50 % 57 114 196
40 % 58 122 203
30 % 72 203 129

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures