Sequence Similarity Clusters for the Entities in PDB 1KM4

Entity #1 | Chains: A
OROTIDINE 5'-PHOSPHATE DECARBOXYLASE protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57226
95 % 50 114 125 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.5
PDBFlex
90 % 50 114 130
70 % 50 114 149
50 % 50 114 179
40 % 51 122 184
30 % 51 127 191

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.