Sequence Similarity Clusters for the Entities in PDB 1KM2

Entity #1 | Chains: A
OROTIDINE 5'-PHOSPHATE DECARBOXYLASE protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59254
95 % 61 114 129 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.5
PDBFlex
90 % 61 114 133
70 % 61 114 155
50 % 61 114 186
40 % 62 122 193
30 % 62 127 198

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures