Sequence Similarity Clusters for the Entities in PDB 1KLU

Entity #1 | Chains: A
HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN protein, length: 179 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 74 227
95 % 10 81 288
90 % 10 97 232
70 % 10 97 264
50 % 14 149 176
40 % 14 149 189
30 % 27 310 94
Entity #2 | Chains: B
HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR-1 BETA CHAIN protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 38 564
95 % 3 41 713
90 % 10 76 331
70 % 13 140 161
50 % 14 149 175
40 % 14 149 188
30 % 28 310 94
Entity #3 | Chains: C
Triosephosphate isomerase peptide protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: D
ENTEROTOXIN TYPE C-3 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 8794
95 % 2 29 1348
90 % 2 29 1370
70 % 2 29 1389
50 % 5 56 492
40 % 6 59 478
30 % 15 88 321

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.