Sequence Similarity Clusters for the Entities in PDB 1KLU

Entity #1 | Chains: A
HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN protein, length: 179 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 71 228
95 % 8 78 289
90 % 8 94 229
70 % 8 94 264
50 % 12 146 173
40 % 12 146 187
30 % 23 304 83
Entity #2 | Chains: B
HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR-1 BETA CHAIN protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 38 549
95 % 3 41 681
90 % 8 73 337
70 % 11 137 163
50 % 12 146 172
40 % 12 146 186
30 % 24 304 83
Entity #3 | Chains: C
Triosephosphate isomerase peptide protein, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: D
ENTEROTOXIN TYPE C-3 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 8500
95 % 2 29 1306
90 % 2 29 1328
70 % 2 29 1353
50 % 5 56 472
40 % 6 59 468
30 % 15 88 311

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.