Sequence Similarity Clusters for the Entities in PDB 1KLJ

Entity #1 | Chains: L
factor VIIa protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 34 34 1268
95 % 34 34 1717 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 34 34 1759
70 % 34 34 1769
50 % 34 34 1800
40 % 34 34 1799
30 % 34 34 1757
Entity #2 | Chains: H
factor VIIa protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 85 97 322
95 % 89 101 415 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 0.7
PDBFlex
90 % 89 101 450
70 % 89 101 483
50 % 89 101 528
40 % 1678 1864 4
30 % 1690 1886 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures