Sequence Similarity Clusters for the Entities in PDB 1KLJ

Entity #1 | Chains: L
factor VIIa protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 34 34 1247
95 % 34 34 1680 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 34 34 1722
70 % 34 34 1738
50 % 34 34 1772
40 % 34 34 1776
30 % 34 34 1735
Entity #2 | Chains: H
factor VIIa protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 85 97 308
95 % 89 101 400 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 0.7
PDBFlex
90 % 89 101 428
70 % 89 101 463
50 % 89 101 522
40 % 1557 1721 4
30 % 1680 1871 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures