Sequence Similarity Clusters for the Entities in PDB 1KLF

Entity #1 | Chains: A,C,E,G,I,K,M,O
CHAPERONE PROTEIN FIMC protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 2139
95 % 6 11 1524 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.0
PDBFlex
90 % 6 11 1542
70 % 6 11 1565
50 % 7 12 1531
40 % 7 12 1520
30 % 37 43 641
Entity #2 | Chains: B,D,F,H,J,L,N,P
FIMH PROTEIN protein, length: 279 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 9 1281
95 % 11 15 1124 Flexibility: Medium
Max RMSD: 16.9, Avg RMSD: 7.2
PDBFlex
90 % 11 15 1151
70 % 11 15 1184
50 % 11 15 1239
40 % 11 15 1238
30 % 11 15 1232

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures