Sequence Similarity Clusters for the Entities in PDB 1KLF

Entity #1 | Chains: A,C,E,G,I,K,M,O
CHAPERONE PROTEIN FIMC protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 2200
95 % 6 11 1590 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.0
PDBFlex
90 % 6 11 1616
70 % 6 11 1625
50 % 7 12 1572
40 % 7 12 1563
30 % 37 44 648
Entity #2 | Chains: B,D,F,H,J,L,N,P
FIMH PROTEIN protein, length: 279 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 11 1258
95 % 11 17 1121 Flexibility: Medium
Max RMSD: 16.9, Avg RMSD: 7.2
PDBFlex
90 % 11 17 1156
70 % 11 17 1178
50 % 11 17 1229
40 % 11 17 1221
30 % 11 17 1226

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures