Sequence Similarity Clusters for the Entities in PDB 1KL3

Entity #1 | Chains: A,B,C,D
streptavidin protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 9849
95 % 75 144 74 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.3
PDBFlex
90 % 77 147 73
70 % 77 147 92
50 % 77 148 118
40 % 77 148 142
30 % 95 203 100
Entity #2 | Chains: E,F,G,H
strep-tag II peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures