Sequence Similarity Clusters for the Entities in PDB 1KL3

Entity #1 | Chains: A,B,C,D
streptavidin protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 9288
95 % 75 144 68 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.3
PDBFlex
90 % 77 147 69
70 % 77 147 82
50 % 77 148 108
40 % 77 148 132
30 % 95 201 82
Entity #2 | Chains: E,F,G,H
strep-tag II peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.