Sequence Similarity Clusters for the Entities in PDB 1KL2

Entity #1 | Chains: A,B
Serine Hydroxymethyltransferase protein, length: 419 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 14778
95 % 37 39 1434 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.2
PDBFlex
90 % 37 39 1458
70 % 38 40 1331
50 % 56 59 608
40 % 92 104 259
30 % 92 106 258

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2DKJ 1 A, B serine hydroxymethyltransferase 274 2.1.2.1 | Details
2 4MSO 1 A, B Serine hydroxymethyltransferase 95486 2.1.2.1 | Details
3 3H7F 1 A, B Serine hydroxymethyltransferase 1 1773 2.1.2.1 | Details
4 4N0W 1 A, B, C, D Serine hydroxymethyltransferase 95486 2.1.2.1 | Details
5 3ECD 1 A, B, C, D Serine hydroxymethyltransferase 2 28450 2.1.2.1 | Details
6 2VIA 1 A SERINE HYDROXYMETHYLTRANSFERASE RESIDUES 1-405 1422 2.1.2.1 | Details
7 2W7E 1 A SERINE HYDROXYMETHYLTRANSFERASE SCHIFF LINKAGE BETWEEN LYS A226 AND PLP A501 RESIDUES 1-405 1422 2.1.2.1 | Details
8 2W7F 1 A SERINE HYDROXYMETHYLTRANSFERASE SCHIFF LINKAGE BETWEEN LYS A226 AND PLP A501 RESIDUES 1-405 1422 2.1.2.1 | Details
9 2VI8 1 A SERINE HYDROXYMETHYLTRANSFERASE RESIDUES 1-405 1422 2.1.2.1 | Details
10 2W7H 1 A SERINE HYDROXYMETHYLTRANSFERASE RESIDUES 1-405 1422 2.1.2.1 | Details
11 4J5U 1 A, B Serine hydroxymethyltransferase 783 2.1.2.1 | Details
12 2VMR 1 A SERINE HYDROXYMETHYLTRANSFERASE SCHIFF LINKAGE BETWEEN LYS A 226 AND PLP B 501 RESIDUES 1-405 1422 2.1.2.1 | Details
13 2W7J 1 A SERINE HYDROXYMETHYLTRANSFERASE RESIDUES 1-405 1422 2.1.2.1 | Details
14 2VMQ 1 A SERINE HYDROXYMETHYLTRANSFERASE SCHIFF LINKAGE BETWEEN GLY B 502 AND PLP B 501 RESIDUES 1-405 1422 2.1.2.1 | Details
15 2VMZ 1 A SERINE HYDROXYMETHYLTRANSFERASE RESIDUES 1-405 1422 2.1.2.1 | Details
16 3GBX 1 A, B Serine hydroxymethyltransferase 90371 2.1.2.1 | Details
17 6CD0 1 A, B, D Serine hydroxymethyltransferase 3880 2.1.2.1 | Details
18 6CD0 2 C Serine hydroxymethyltransferase 3880 2.1.2.1 | Details
19 2VMT 1 A SERINE HYDROXYMETHYLTRANSFERASE SCHIFF LINKAGE BETWEEN PLP B 501 AND SER B 502 RESIDUES 1-405 1422 2.1.2.1 | Details
20 2VMW 1 A SERINE HYDROXYMETHYLTRANSFERASE RESIDUES 1-405 1422 2.1.2.1 | Details
21 2VMV 1 A SERINE HYDROXYMETHYLTRANSFERASE SCHIFF LINKAGE BETWEEN LYS A 226 AND PLP B 501 RESIDUES 1-405 1422 2.1.2.1 | Details
22 2VMO 1 A SERINE HYDROXYMETHYLTRANSFERASE SCHIFF LINKAGE BETWEEN GLY B 502 AND PLP B 501 RESIDUES 1-405 1422 2.1.2.1 | Details
23 3N0L 1 A, B Serine hydroxymethyltransferase 197 2.1.2.1 | Details
24 2VMP 1 A SERINE HYDROXYMETHYLTRANSFERASE SCHIFF LINKAGE BETWEEN L-SER B 502 AND PLP B 501 RESIDUES 1-405 1422 2.1.2.1 | Details
25 2VGU 1 A SERINE HYDROXYMETHYLTRANSFERASE RESIDUES 1-405 1422 2.1.2.1 | Details
26 2W7D 1 A SERINE HYDROXYMETHYLTRANSFERASE SCHIFF LINKAGE BETWEEN LYS A226 AND PLP A501 RESIDUES 1-405 1422 2.1.2.1 | Details
27 2VMN 1 A SERINE HYDROXYMETHYLTRANSFERASE SCHIFF LINKAGE BETWEEN LYS A 226 AND PLP B 501 RESIDUES 1-405 1422 2.1.2.1 | Details
28 2VMX 1 A SERINE HYDROXYMETHYLTRANSFERASE RESIDUES 1-405 1422 2.1.2.1 | Details
29 2VGT 1 A SERINE HYDROXYMETHYLTRANSFERASE RESIDUES 1-405 1422 2.1.2.1 | Details
30 4P3M 1 A, B Serine hydroxymethyltransferase 357794 2.1.2.1 | Details
31 2VIB 1 A SERINE HYDROXYMETHYLTRANSFERASE 1422 2.1.2.1 | Details
32 2VGW 1 A SERINE HYDROXYMETHYLTRANSFERASE RESIDUES 1-405 1422 2.1.2.1 | Details
33 5VC2 1 A, B Serine hydroxymethyltransferase 210 2.1.2.1 | Details
34 3PGY 1 A, B, C, D Serine hydroxymethyltransferase 1280 2.1.2.1 | Details
35 2W7G 1 A SERINE HYDROXYMETHYLTRANSFERASE SCHIFF LINKAGE BETWEEN LYS A226 AND PLP A501 RESIDUES 1-405 1422 2.1.2.1 | Details
36 1KL1 1 A Serine Hydroxymethyltransferase 1422 2.1.2.1 | Details
37 2VMU 1 A SERINE HYDROXYMETHYLTRANSFERASE RESIDUES 1-405 1422 2.1.2.1 | Details
38 2W7M 1 A SERINE HYDROXYMETHYLTRANSFERASE RESIDUES 1-405 1422 2.1.2.1 | Details
39 1KKJ 1 A Serine Hydroxymethyltransferase 1422 2.1.2.1 | Details
40 1KKP 1 A Serine Hydroxymethyltransferase 1422 2.1.2.1 | Details
41 6CD1 1 A, B, C, D, F Serine hydroxymethyltransferase 3880 2.1.2.1 | Details
42 6CD1 2 E, G, H Serine hydroxymethyltransferase 3880 2.1.2.1 | Details
43 4OT8 1 A, B, C, D Serine hydroxymethyltransferase 95486 2.1.2.1 | Details
44 4WXG 1 A, C Serine hydroxymethyltransferase 1308 2.1.2.1 | Details
45 2VGS 1 A SERINE HYDROXYMETHYLTRANSFERASE SCHIFF LINKAGE BETWEEN LYS A 226 AND PLP B 501 RESIDUES 1-405 1422 2.1.2.1 | Details
46 4OTL 1 A, B, C, D Serine hydroxymethyltransferase 95486 2.1.2.1 | Details
47 2VI9 1 A SERINE HYDROXYMETHYLTRANSFERASE RESIDUES 1-405 1422 2.1.2.1 | Details
48 6CCZ 1 A Serine hydroxymethyltransferase 3880 2.1.2.1 | Details
49 6CCZ 2 B Serine hydroxymethyltransferase 3880 2.1.2.1 | Details
50 1YJS 1 A SERINE HYDROXYMETHYLTRANSFERASE Serine methylase 1422 2.1.2.1 | Details
51 4WXB 1 A, B, C, D Serine hydroxymethyltransferase 1308 2.1.2.1 | Details
52 6DK3 1 A Serine hydroxymethyltransferase, mitochondrial 9606 2.1.2.1 | Details
53 2VMS 1 A SERINE HYDROXYMETHYLTRANSFERASE RESIDUES 1-405 1422 2.1.2.1 | Details
54 1YJZ 1 A SERINE HYDROXYMETHYLTRANSFERASE Serine methylase 1422 2.1.2.1 | Details
55 4WXF 1 A, C Serine hydroxymethyltransferase 1308 2.1.2.1 | Details
56 1YJY 1 A SERINE HYDROXYMETHYLTRANSFERASE Serine methylase 1422 2.1.2.1 | Details
57 2VGV 1 A SERINE HYDROXYMETHYLTRANSFERASE RESIDUES 1-405 1422 2.1.2.1 | Details
58 1DFO 1 A, B, C, D SERINE HYDROXYMETHYLTRANSFERASE 562 2.1.2.1 | Details
59 5XMQ 1 A, B, C Serine hydroxymethyltransferase RESIDUES 1-442 5855 2.1.2.1 | Details
60 4TN4 1 A, B, C Serine hydroxymethyltransferase Plasmodium vivax SHMT with PLP-glycine Schiff base and a novel pyrazolopyran TH2S 5855
61 5GVK 1 A, B, C Serine hydroxymethyltransferase, putative 5855
62 5XMV 1 A, B, C Serine hydroxymethyltransferase RESIDUES 1-442 5855 2.1.2.1 | Details
63 5YG4 1 A, B, C Serine hydroxymethyltransferase 5855 2.1.2.1 | Details
64 5VMB 1 A Serine hydroxymethyltransferase 470 2.1.2.1 | Details
65 4PFF 1 A, B, C Serine hydroxymethyltransferase, putative PLP Schiff base RESIDUES 1-442 5855
66 4OYT 1 A, B, C Serine hydroxymethyltransferase, putative D-serine and folinic acid at the pockets 5855
67 5YFY 1 A, B, C Serine hydroxymethyltransferase 5855 2.1.2.1 | Details
68 5GVN 1 A, B, C Serine hydroxymethyltransferase, putative 5855
69 5V7I 1 A, B Serine hydroxymethyltransferase, mitochondrial 9606 2.1.2.1 | Details
70 5GVM 1 A, B, C Serine hydroxymethyltransferase, putative 5855
71 5YG2 1 A, B, C Serine hydroxymethyltransferase 5855 2.1.2.1 | Details
72 5GVL 1 A, B, C Serine hydroxymethyltransferase, putative 5855
73 5YFZ 1 A, B, C Serine hydroxymethyltransferase 5855 2.1.2.1 | Details
74 1RV3 1 A, B Serine hydroxymethyltransferase, cytosolic 9986 2.1.2.1 | Details
75 5XMT 1 A, B, C Serine hydroxymethyltransferase RESIDUES 1-442 5855 2.1.2.1 | Details
76 4PFN 1 A, B, C Serine hydroxymethyltransferase, putative PLP-L-serine external aldimine 5855
77 5YG3 1 A, B, C Serine hydroxymethyltransferase 5855 2.1.2.1 | Details
78 5GVP 1 A, B, C Serine hydroxymethyltransferase, putative 5855
79 5XMS 1 A, B, C Serine hydroxymethyltransferase RESIDUES 1-442 5855 2.1.2.1 | Details
80 2W7L 1 A SERINE HYDROXYMETHYLTRANSFERASE RESIDUES 1-405 1422 2.1.2.1 | Details
81 5YG0 1 A, B, C Serine hydroxymethyltransferase 5855 2.1.2.1 | Details
82 5XMU 1 A, B, C Serine hydroxymethyltransferase 5855 2.1.2.1 | Details
83 1RVU 1 A, B Serine hydroxymethyltransferase, cytosolic 9986 2.1.2.1 | Details
84 4PVF 1 A, B Serine hydroxymethyltransferase, mitochondrial 9606 2.1.2.1 | Details
85 5YG1 1 A, B, C Serine hydroxymethyltransferase 5855 2.1.2.1 | Details
86 5XMR 1 A, B, C Serine hydroxymethyltransferase RESIDUES 1-442 5855 2.1.2.1 | Details
87 5Z0Y 1 A Serine hydroxymethyltransferase 460519 2.1.2.1 | Details
88 2W7K 1 A SERINE HYDROXYMETHYLTRANSFERASE RESIDUES 1-405 1422 2.1.2.1 | Details
89 5X3V 1 A, B Serine hydroxymethyltransferase, mitochondrial K74R 9606 2.1.2.1 | Details
90 1BJ4 1 A PROTEIN (SERINE HYDROXYMETHYLTRANSFERASE) 9606 2.1.2.1 | Details
91 1EQB 1 A, B, C, D SERINE HYDROXYMETHYLTRANSFERASE 562 2.1.2.1 | Details
92 1KL2 1 A, B Serine Hydroxymethyltransferase 1422 2.1.2.1 | Details
93 4TMR 1 A, B, C Serine hydroxymethyltransferase, putative Plasmodium vivax SHMT with PLP-glycine Schiff base and a novel pyrazolopyran 99S 5855
94 2VMY 1 A, B SERINE HYDROXYMETHYLTRANSFERASE RESIDUES 1-405 1422 2.1.2.1 | Details
95 1LS3 1 A, B, C, D Serine Hydroxymethyltransferase 9986 2.1.2.1 | Details
96 2W7I 1 A SERINE HYDROXYMETHYLTRANSFERASE SCHIFF LINKAGE BETWEEN LYS A226 AND PLP A501 RESIDUES 1-405 1422 2.1.2.1 | Details
97 5XMP 1 A, B, C Serine hydroxymethyltransferase RESIDUES 1-442 5855 2.1.2.1 | Details
98 1CJ0 1 A, B PROTEIN (SERINE HYDROXYMETHYLTRANSFERASE) EACH PROTEIN MOLECULE HAS COVALENTLY LINKED PLP COFACTOR 9986 2.1.2.1 | Details
99 1RV4 1 A, B Serine hydroxymethyltransferase, cytosolic 9986 2.1.2.1 | Details
100 4UQV 1 A, B, C, D, E, F, G, H, I, J, K, L SERINE HYDROXYMETHYLTRANSFERASE 2190 2.1.2 | Details
101 1RVY 1 A, B Serine hydroxymethyltransferase, cytosolic 9986 2.1.2.1 | Details
102 1EJI 1 A, B, C, D SERINE HYDROXYMETHYLTRANSFERASE 10090 2.1.2.1 | Details
103 4BHD 1 A, B SERINE HYDROXYMETHYLTRANSFERASE 2190
104 4O6Z 1 A, B, C, D Serine hydroxymethyltransferase 5833 2.1.2.1 | Details
105 3G8M 1 A Serine hydroxymethyltransferase 562 2.1.2.1 | Details
106 6FL5 1 A, D, G, J Serine hydroxymethyltransferase, cytosolic 9606 2.1.2.1 | Details